Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_110116 | Not Available | + | 3699433 - 3700080 | 25191.2 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN04489864_110117 | Not Available | + | 3700275 - 3702680 | 87587.9 |
| hypothetical protein | SAMN04489864_110118 | Not Available | + | 3702622 - 3702717 | 3743.66 |
| peptide/nickel transport system substrate-binding protein | SAMN04489864_110119 | Not Available | - | 3702902 - 3704533 | 62161.7 |
| hypothetical protein | SAMN04489864_110120 | Not Available | + | 3704614 - 3705069 | 17038.7 |
| nad(p)h-dependent fmn reductase | SAMN04489864_110121 | Not Available | - | 3705081 - 3705602 | 19607.7 |
| chromosome partitioning protein | SAMN04489864_110122 | Not Available | + | 3705768 - 3706571 | 29361.6 |
| chromosome partitioning protein, parb family | SAMN04489864_110123 | Not Available | + | 3706581 - 3707480 | 33437.3 |
| hypothetical protein | SAMN04489864_110124 | Not Available | + | 3707480 - 3708154 | 24875.5 |
| dihydrodipicolinate reductase | SAMN04489864_110125 | Not Available | + | 3708151 - 3708891 | 27538.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.