Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna binding domain-containing protein, excisionase family | SAMN04489864_101310 | Not Available | - | 341015 - 341407 | 15151.7 |
| helix-turn-helix domain-containing protein | SAMN04489864_101311 | Not Available | + | 341501 - 341971 | 17844.1 |
| capsule assembly protein wzi | SAMN04489864_101312 | Not Available | + | 342058 - 343740 | 63419.9 |
| polysaccharide export outer membrane protein | SAMN04489864_101313 | Not Available | + | 343945 - 344724 | 28500.6 |
| capsular exopolysaccharide family | SAMN04489864_101314 | Not Available | + | 344731 - 347124 | 89290.8 |
| udp-n-acetyl-d-galactosamine dehydrogenase | SAMN04489864_101315 | Not Available | + | 347133 - 348440 | 48265.1 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | SAMN04489864_101316 | Not Available | + | 348462 - 349478 | 37543.0 |
| hypothetical protein | SAMN04489864_101317 | Not Available | + | 349478 - 350680 | 44891.2 |
| predicted oxidoreductase | SAMN04489864_101318 | Not Available | + | 350664 - 351506 | 31773.3 |
| gluconate 5-dehydrogenase | SAMN04489864_101319 | Not Available | + | 351513 - 352298 | 28782.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.