Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_11076 | Not Available | + | 3654032 - 3654667 | 24258.7 |
| bacteroides conjugative transposon traj protein | SAMN04489864_11077 | Not Available | + | 3654670 - 3655875 | 42939.5 |
| bacteroides conjugative transposon trak protein | SAMN04489864_11078 | Not Available | + | 3655895 - 3656515 | 24022.0 |
| hypothetical protein | SAMN04489864_11079 | Not Available | + | 3656515 - 3656892 | 14283.5 |
| bacteroides conjugative transposon tram protein | SAMN04489864_11080 | Not Available | + | 3656900 - 3658165 | 46300.1 |
| bacteroides conjugative transposon tran protein | SAMN04489864_11081 | Not Available | + | 3658190 - 3659035 | 32037.9 |
| hypothetical protein | SAMN04489864_11082 | Not Available | + | 3659097 - 3660275 | 45425.1 |
| hypothetical protein | SAMN04489864_11083 | Not Available | + | 3660278 - 3660553 | 10413.8 |
| hypothetical protein | SAMN04489864_11084 | Not Available | + | 3660654 - 3660842 | 7256.61 |
| Trna-met | Not Available | Not Available | + | 3662482 - 3662558 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.