Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rtec protein | SAMN04489864_11066 | Not Available | + | 3641173 - 3642012 | 32330.9 |
| hypothetical protein | SAMN04489864_11067 | Not Available | - | 3642170 - 3642544 | 14483.8 |
| hypothetical protein | SAMN04489864_11068 | Not Available | + | 3642931 - 3643377 | 16849.1 |
| protein of unknown function | SAMN04489864_11069 | Not Available | + | 3643524 - 3643829 | 10961.4 |
| protein of unknown function | SAMN04489864_11070 | Not Available | + | 3643842 - 3644270 | 16891.2 |
| helicase conserved c-terminal domain-containing protein | SAMN04489864_11071 | Not Available | + | 3644307 - 3649844 | 210136.0 |
| protein of unknown function | SAMN04489864_11072 | Not Available | + | 3649844 - 3650167 | 11734.1 |
| bacteroides conjugation system atpase, trag family | SAMN04489864_11073 | Not Available | + | 3650199 - 3652664 | 94861.0 |
| hypothetical protein | SAMN04489864_11074 | Not Available | + | 3652679 - 3653356 | 26658.9 |
| hypothetical protein | SAMN04489864_11075 | Not Available | + | 3653377 - 3654027 | 24541.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.