Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04489864_11056 | Not Available | + | 3633131 - 3634492 | 50529.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN04489864_11057 | Not Available | + | 3634494 - 3635960 | 56296.2 |
| hypothetical protein | SAMN04489864_11058 | Not Available | - | 3636001 - 3637071 | 41199.3 |
| hypothetical protein | SAMN04489864_11059 | Not Available | - | 3637111 - 3637353 | 8462.89 |
| hypothetical protein | SAMN04489864_11060 | Not Available | - | 3637394 - 3637870 | 17737.2 |
| arac-type dna-binding protein | SAMN04489864_11061 | Not Available | - | 3638000 - 3638341 | 13164.1 |
| hypothetical protein | SAMN04489864_11062 | Not Available | - | 3638344 - 3639111 | 29437.4 |
| hypothetical protein | SAMN04489864_11063 | Not Available | - | 3639116 - 3639754 | 24391.4 |
| hypothetical protein | SAMN04489864_11064 | Not Available | - | 3639760 - 3640221 | 16785.7 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04489864_11065 | Not Available | - | 3640234 - 3640884 | 24364.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.