Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| single-strand dna-binding protein | SAMN04489864_11046 | Not Available | - | 3620241 - 3620648 | 14733.3 |
| hypothetical protein | SAMN04489864_11047 | Not Available | + | 3621137 - 3622741 | 61494.2 |
| hypothetical protein | SAMN04489864_11048 | Not Available | + | 3622725 - 3624341 | 62475.3 |
| hypothetical protein | SAMN04489864_11049 | Not Available | + | 3624361 - 3624837 | 17914.3 |
| hypothetical protein | SAMN04489864_11050 | Not Available | + | 3624856 - 3626304 | 55862.4 |
| lyttr dna-binding domain-containing protein | SAMN04489864_11051 | Not Available | - | 3626366 - 3627190 | 32148.6 |
| hypothetical protein | SAMN04489864_11052 | Not Available | + | 3627312 - 3627692 | 14000.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04489864_11053 | Not Available | + | 3627705 - 3628304 | 23432.6 |
| protein of unknown function | SAMN04489864_11054 | Not Available | + | 3628366 - 3629553 | 43524.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_11055 | Not Available | + | 3629869 - 3633120 | 120005.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.