Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_11036 | Not Available | + | 3613679 - 3613960 | 10345.7 |
| radc-like jab domain-containing protein | SAMN04489864_11037 | Not Available | - | 3613972 - 3614430 | 16596.3 |
| hypothetical protein | SAMN04489864_11038 | Not Available | + | 3614906 - 3615133 | 8332.45 |
| prtrc system thif family protein | SAMN04489864_11039 | Not Available | - | 3615155 - 3615961 | 30221.1 |
| prtrc system protein b | SAMN04489864_11040 | Not Available | - | 3615958 - 3616671 | 27245.8 |
| hypothetical protein | SAMN04489864_11041 | Not Available | - | 3616682 - 3617836 | 45125.5 |
| prtrc system protein c | SAMN04489864_11042 | Not Available | - | 3617854 - 3618072 | 8145.83 |
| prtrc system protein e | SAMN04489864_11043 | Not Available | - | 3618096 - 3618683 | 22249.2 |
| hypothetical protein | SAMN04489864_11044 | Not Available | - | 3618701 - 3619078 | 14655.0 |
| phage/plasmid-like protein tigr03299 | SAMN04489864_11045 | Not Available | - | 3619131 - 3620204 | 39291.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.