Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_11026 | Not Available | + | 3588739 - 3589341 | 22738.1 |
| hypothetical protein | SAMN04489864_11027 | Not Available | + | 3589552 - 3595656 | 225745.0 |
| hypothetical protein | SAMN04489864_11028 | Not Available | + | 3595661 - 3596449 | 30184.3 |
| uncharacterized conserved protein rhas, contains 28 rhs repeats | SAMN04489864_11029 | Not Available | + | 3596460 - 3608012 | 436146.0 |
| hypothetical protein | SAMN04489864_11030 | Not Available | + | 3607969 - 3608718 | 29121.2 |
| hypothetical protein | SAMN04489864_11031 | Not Available | + | 3608971 - 3609099 | 4821.21 |
| hypothetical protein | SAMN04489864_11032 | Not Available | + | 3609237 - 3609452 | 8356.19 |
| type iv secretory pathway, vird4 component, trag/trad family atpase | SAMN04489864_11033 | Not Available | - | 3609681 - 3611666 | 74656.9 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN04489864_11034 | Not Available | - | 3611693 - 3612958 | 47331.0 |
| hypothetical protein | SAMN04489864_11035 | Not Available | - | 3612946 - 3613341 | 15532.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.