Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_11016 | Not Available | - | 3576093 - 3578501 | 92386.1 |
| pd-(d/e)xk nuclease superfamily protein | SAMN04489864_11017 | Not Available | - | 3578470 - 3579444 | 38328.4 |
| helix-turn-helix | SAMN04489864_11018 | Not Available | - | 3579441 - 3579782 | 13027.8 |
| helix-turn-helix domain-containing protein | SAMN04489864_11019 | Not Available | - | 3579858 - 3581957 | 78477.2 |
| hypothetical protein | SAMN04489864_11020 | Not Available | - | 3582183 - 3582281 | 3794.46 |
| hypothetical protein | SAMN04489864_11021 | Not Available | - | 3582268 - 3583269 | 38261.4 |
| hypothetical protein | SAMN04489864_11022 | Not Available | + | 3583586 - 3584269 | 27164.2 |
| hypothetical protein | SAMN04489864_11023 | Not Available | - | 3584336 - 3586972 | 100414.0 |
| hypothetical protein | SAMN04489864_11024 | Not Available | + | 3587109 - 3588230 | 42291.9 |
| chaperone for outer membrane proteins, skp family | SAMN04489864_11025 | Not Available | + | 3588227 - 3588742 | 19921.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.