Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | + | 3554946 - 3555022 | Not Available |
| subtilase family protein | SAMN04489864_1107 | Not Available | + | 3558512 - 3560287 | 66359.3 |
| hypothetical protein | SAMN04489864_1108 | Not Available | + | 3560517 - 3561377 | 30471.8 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN04489864_1109 | Not Available | + | 3561410 - 3564250 | 104033.0 |
| hypothetical protein | SAMN04489864_11010 | Not Available | + | 3564540 - 3566327 | 70294.6 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04489864_11011 | Not Available | + | 3566593 - 3572091 | 189747.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04489864_11012 | Not Available | + | 3572096 - 3572977 | 32488.9 |
| subtilase family protein | SAMN04489864_11013 | Not Available | - | 3573332 - 3574543 | 42995.5 |
| hypothetical protein | SAMN04489864_11014 | Not Available | - | 3574577 - 3575713 | 43421.0 |
| hypothetical protein | SAMN04489864_11015 | Not Available | - | 3575716 - 3576081 | 13855.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.