Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04489864_101300 | Not Available | + | 331587 - 332819 | 45299.3 |
| ribosomal protein s18 acetylase rimi | SAMN04489864_101301 | Not Available | + | 332896 - 333504 | 22378.3 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04489864_101302 | Not Available | + | 333501 - 334730 | 45186.6 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04489864_101303 | Not Available | + | 334714 - 335307 | 22394.0 |
| serine/threonine-protein kinase hipa | SAMN04489864_101304 | Not Available | - | 335537 - 336784 | 47155.8 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04489864_101305 | Not Available | - | 336777 - 337082 | 11468.0 |
| fic/doc family protein | SAMN04489864_101306 | Not Available | + | 337316 - 338218 | 34876.6 |
| hypothetical protein | SAMN04489864_101307 | Not Available | - | 338355 - 338846 | 18121.9 |
| chap domain-containing protein | SAMN04489864_101308 | Not Available | - | 339132 - 339659 | 19508.2 |
| hypothetical protein | SAMN04489864_101309 | Not Available | - | 340003 - 340650 | 23522.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.