Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN04489864_109160 | Not Available | - | 3516262 - 3518040 | 65329.9 |
| acetyl-coa acyltransferase | SAMN04489864_109161 | Not Available | - | 3518307 - 3519482 | 41405.3 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN04489864_109162 | Not Available | - | 3519719 - 3522139 | 89558.5 |
| dna-binding transcriptional regulator, marr family | SAMN04489864_109163 | Not Available | - | 3522105 - 3522557 | 16707.1 |
| uncharacterized conserved protein, duf885 familyt | SAMN04489864_109164 | Not Available | - | 3522631 - 3524364 | 67054.9 |
| protein of unknown function | SAMN04489864_109165 | Not Available | + | 3524496 - 3525182 | 26461.8 |
| putative auto-transporter adhesin, head gin domain | SAMN04489864_109166 | Not Available | - | 3525231 - 3525968 | 25255.1 |
| peptidase family m1 | SAMN04489864_109167 | Not Available | - | 3526057 - 3527715 | 63010.6 |
| hypothetical protein | SAMN04489864_109168 | Not Available | - | 3527857 - 3529725 | 70825.9 |
| dihydrolipoamide dehydrogenase | SAMN04489864_109169 | Not Available | + | 3529864 - 3531270 | 49912.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.