Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN04489864_109150 | Not Available | - | 3508098 - 3508331 | 8881.92 |
| hepn domain-containing protein | SAMN04489864_109151 | Not Available | + | 3508662 - 3509516 | 32048.4 |
| hypothetical protein | SAMN04489864_109152 | Not Available | + | 3509735 - 3510037 | 11732.4 |
| hypothetical protein | SAMN04489864_109153 | Not Available | + | 3510406 - 3511056 | 23548.0 |
| hypothetical protein | SAMN04489864_109154 | Not Available | + | 3511121 - 3511759 | 23381.2 |
| hypothetical protein | SAMN04489864_109155 | Not Available | + | 3512073 - 3512594 | 19555.7 |
| hypothetical protein | SAMN04489864_109156 | Not Available | + | 3513041 - 3513517 | 18339.5 |
| deoxyribodipyrimidine photo-lyase | SAMN04489864_109157 | Not Available | + | 3513565 - 3514872 | 50891.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN04489864_109158 | Not Available | - | 3514869 - 3515729 | 31543.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN04489864_109159 | Not Available | - | 3515731 - 3516231 | 18048.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.