Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_109110 | Not Available | + | 3456610 - 3456891 | 10647.0 |
| hypothetical protein | SAMN04489864_109111 | Not Available | - | 3456951 - 3458597 | 58764.6 |
| hypothetical protein | SAMN04489864_109112 | Not Available | - | 3458609 - 3459280 | 24577.9 |
| hypothetical protein | SAMN04489864_109113 | Not Available | + | 3459542 - 3460234 | 26361.5 |
| uncharacterized conserved protein, duf1800 family | SAMN04489864_109114 | Not Available | + | 3460350 - 3462164 | 67315.2 |
| uncharacterized conserved protein, duf1501 family | SAMN04489864_109115 | Not Available | + | 3462172 - 3463437 | 45783.9 |
| peptidase family m28 | SAMN04489864_109116 | Not Available | + | 3463669 - 3465243 | 57084.0 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN04489864_109117 | Not Available | + | 3465251 - 3466738 | 56505.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04489864_109118 | Not Available | - | 3466990 - 3470697 | 131225.0 |
| hypothetical protein | SAMN04489864_109119 | Not Available | + | 3470765 - 3471229 | 17350.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.