Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_109100 | Not Available | - | 3443373 - 3446498 | 113493.0 |
| iron complex outermembrane recepter protein | SAMN04489864_109101 | Not Available | - | 3446552 - 3448726 | 81110.5 |
| hypothetical protein | SAMN04489864_109102 | Not Available | + | 3449136 - 3449267 | 4900.16 |
| hypothetical protein | SAMN04489864_109103 | Not Available | - | 3449268 - 3449723 | 17576.6 |
| hypothetical protein | SAMN04489864_109104 | Not Available | - | 3449671 - 3451488 | 68066.7 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04489864_109105 | Not Available | + | 3451712 - 3452134 | 15590.0 |
| cd2+/zn2+-exporting atpase | SAMN04489864_109106 | Not Available | + | 3452194 - 3454101 | 68812.5 |
| eama-like transporter family protein | SAMN04489864_109107 | Not Available | + | 3454176 - 3455048 | 31943.2 |
| hypothetical protein | SAMN04489864_109108 | Not Available | - | 3455045 - 3455287 | 9657.34 |
| predicted arabinose efflux permease, mfs family | SAMN04489864_109109 | Not Available | - | 3455330 - 3456505 | 42799.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.