Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-succinyl-l-ornithine transcarbamylase | SAMN04489864_10118 | Not Available | + | 18868 - 19845 | 36332.7 |
| n-acetylglutamate kinase | SAMN04489864_10119 | Not Available | + | 19947 - 20735 | 27857.9 |
| pyrroline-5-carboxylate reductase | SAMN04489864_10120 | Not Available | + | 20785 - 21594 | 28321.4 |
| acetylornithine deacetylase | SAMN04489864_10121 | Not Available | + | 21605 - 22672 | 39183.8 |
| predicted transcriptional regulator ydee, contains arac-type dna-binding domain | SAMN04489864_10122 | Not Available | - | 22677 - 23132 | 17109.3 |
| hth domain-containing protein | SAMN04489864_10123 | Not Available | - | 23191 - 23907 | 27380.2 |
| res domain-containing protein | SAMN04489864_10124 | Not Available | - | 23922 - 24365 | 17074.7 |
| protein of unknown function | SAMN04489864_10125 | Not Available | - | 24368 - 24796 | 16906.1 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04489864_10126 | Not Available | - | 24930 - 27734 | 104391.0 |
| argininosuccinate lyase | SAMN04489864_10127 | Not Available | + | 27819 - 29150 | 49914.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.