Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_10940 | Not Available | + | 3356266 - 3359949 | 140214.0 |
| protein of unknown function | SAMN04489864_10941 | Not Available | + | 3359981 - 3361867 | 72541.8 |
| hypothetical protein | SAMN04489864_10942 | Not Available | + | 3361898 - 3362632 | 27799.5 |
| hypothetical protein | SAMN04489864_10943 | Not Available | + | 3362770 - 3363738 | 37103.3 |
| hypothetical protein | SAMN04489864_10944 | Not Available | + | 3363725 - 3363952 | 8698.69 |
| uncharacterized protein yydd, contains duf2326 domain | SAMN04489864_10945 | Not Available | + | 3363943 - 3365655 | 66499.2 |
| hypothetical protein | SAMN04489864_10946 | Not Available | - | 3365686 - 3366081 | 16174.5 |
| hypothetical protein | SAMN04489864_10947 | Not Available | + | 3366260 - 3366898 | 23582.5 |
| dna repair protein radc | SAMN04489864_10948 | Not Available | + | 3367393 - 3367863 | 17563.4 |
| hypothetical protein | SAMN04489864_10949 | Not Available | + | 3367897 - 3368112 | 8315.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.