Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacteroides conjugation system atpase, trag family | SAMN04489864_10930 | Not Available | + | 3346812 - 3349286 | 92924.3 |
| hypothetical protein | SAMN04489864_10931 | Not Available | + | 3349309 - 3349689 | 14410.6 |
| hypothetical protein | SAMN04489864_10932 | Not Available | + | 3349703 - 3350407 | 27086.3 |
| hypothetical protein | SAMN04489864_10933 | Not Available | + | 3350394 - 3351038 | 24114.3 |
| hypothetical protein | SAMN04489864_10934 | Not Available | + | 3351025 - 3351666 | 24274.7 |
| bacteroides conjugative transposon traj protein | SAMN04489864_10935 | Not Available | + | 3351676 - 3352857 | 43038.5 |
| bacteroides conjugative transposon trak protein | SAMN04489864_10936 | Not Available | + | 3352870 - 3353508 | 24285.9 |
| bacteroides conjugative transposon tram protein | SAMN04489864_10937 | Not Available | + | 3353726 - 3354808 | 38290.8 |
| hypothetical protein | SAMN04489864_10938 | Not Available | + | 3354805 - 3355860 | 40504.6 |
| histone h1-like protein hc1 | SAMN04489864_10939 | Not Available | + | 3355936 - 3356112 | 6408.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.