Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_108224 | Not Available | + | 3313373 - 3313651 | 10532.3 |
| aaa atpase domain-containing protein | SAMN04489864_1091 | Not Available | - | 3314503 - 3315489 | 38359.3 |
| restriction endonuclease s subunit | SAMN04489864_1092 | Not Available | - | 3315486 - 3317099 | 60416.3 |
| type i restriction enzyme m protein | SAMN04489864_1093 | Not Available | - | 3317096 - 3318481 | 52484.0 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN04489864_1094 | Not Available | - | 3318500 - 3319282 | 30486.9 |
| transcriptional regulator, predicted component of viral defense system | SAMN04489864_1095 | Not Available | - | 3319279 - 3320085 | 31034.5 |
| recombinase | SAMN04489864_1096 | Not Available | - | 3320357 - 3321910 | 59730.7 |
| hypothetical protein | SAMN04489864_1097 | Not Available | - | 3321907 - 3322113 | 8006.98 |
| hypothetical protein | SAMN04489864_1098 | Not Available | + | 3322214 - 3322846 | 24854.0 |
| protein of unknown function | SAMN04489864_1099 | Not Available | + | 3322893 - 3324152 | 48134.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.