Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_108214 | Not Available | - | 3303996 - 3304742 | 27002.6 |
| hypothetical protein | SAMN04489864_108215 | Not Available | - | 3304775 - 3305341 | 23156.0 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN04489864_108216 | Not Available | - | 3305345 - 3306151 | 28775.9 |
| carboxyl-terminal processing protease | SAMN04489864_108217 | Not Available | + | 3306343 - 3307950 | 59546.8 |
| gtp-binding protein | SAMN04489864_108218 | Not Available | - | 3307959 - 3309260 | 49334.7 |
| gtp-binding protein era | SAMN04489864_108219 | Not Available | - | 3309403 - 3310290 | 33629.7 |
| Trna-met | Not Available | Not Available | + | 3310402 - 3310477 | Not Available |
| Trna-glu | Not Available | Not Available | + | 3310508 - 3310582 | Not Available |
| hypothetical protein | SAMN04489864_108222 | Not Available | - | 3312176 - 3312331 | 6024.45 |
| hypothetical protein | SAMN04489864_108223 | Not Available | + | 3312478 - 3313368 | 34285.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.