Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase | SAMN04489864_108203 | Not Available | - | 3291071 - 3291991 | 34259.0 |
| aspartate kinase | SAMN04489864_108204 | Not Available | + | 3292297 - 3294753 | 89573.1 |
| dinb superfamily protein | SAMN04489864_108205 | Not Available | + | 3294757 - 3295227 | 17999.6 |
| homoserine kinase | SAMN04489864_108206 | Not Available | + | 3295328 - 3296257 | 32843.0 |
| threonine synthase | SAMN04489864_108207 | Not Available | + | 3296267 - 3297586 | 49087.9 |
| chaperone of endosialidase | SAMN04489864_108208 | Not Available | - | 3297610 - 3298023 | 15237.8 |
| hypothetical protein | SAMN04489864_108209 | Not Available | - | 3298070 - 3298399 | 12618.3 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN04489864_108210 | Not Available | - | 3298428 - 3299381 | 35719.1 |
| four helix bundle protein | SAMN04489864_108211 | Not Available | - | 3299501 - 3299899 | 14953.0 |
| methionine synthase (b12-dependent) | SAMN04489864_108212 | Not Available | - | 3299953 - 3303654 | 136557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.