Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_101280 | Not Available | + | 304294 - 304518 | 8357.1 |
| mrna-degrading endonuclease rele, toxin component of the relbe toxin-antitoxin system | SAMN04489864_101281 | Not Available | + | 304508 - 304840 | 12346.4 |
| glucose-1-phosphate thymidylyltransferase | SAMN04489864_101282 | Not Available | + | 304878 - 305738 | 31215.9 |
| gdpmannose 4,6-dehydratase | SAMN04489864_101283 | Not Available | + | 305777 - 306913 | 43005.5 |
| tyrosine-protein phosphatase ywqe | SAMN04489864_101284 | Not Available | - | 307775 - 308497 | 27345.9 |
| redoxin | SAMN04489864_101285 | Not Available | - | 308875 - 310224 | 50458.9 |
| peroxiredoxin | SAMN04489864_101286 | Not Available | - | 310226 - 311743 | 56408.5 |
| susd family protein | SAMN04489864_101287 | Not Available | - | 311763 - 313316 | 58531.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_101288 | Not Available | - | 313328 - 316843 | 129972.0 |
| fecr protein | SAMN04489864_101289 | Not Available | - | 316995 - 318185 | 43550.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.