Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_108183 | Not Available | - | 3273496 - 3274278 | 29479.1 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN04489864_108184 | Not Available | - | 3274366 - 3276342 | 73742.9 |
| l-lactate dehydrogenase complex protein lldf | SAMN04489864_108185 | Not Available | - | 3276386 - 3277846 | 55127.6 |
| peptidase family m28 | SAMN04489864_108186 | Not Available | - | 3277886 - 3279520 | 59296.6 |
| ribose 5-phosphate isomerase b | SAMN04489864_108187 | Not Available | - | 3279548 - 3279988 | 15958.9 |
| sec-independent protein translocase protein tatc | SAMN04489864_108188 | Not Available | - | 3280040 - 3280924 | 33337.8 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN04489864_108189 | Not Available | - | 3281016 - 3282356 | 49432.3 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMN04489864_108190 | Not Available | - | 3282399 - 3282869 | 16840.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04489864_108191 | Not Available | - | 3282942 - 3283937 | 35859.6 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN04489864_108192 | Not Available | - | 3283954 - 3284952 | 36433.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.