Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| enoyl-[acyl-carrier protein] reductase ii | SAMN04489864_108163 | Not Available | + | 3243028 - 3243969 | 33182.8 |
| acylphosphatase | SAMN04489864_108164 | Not Available | + | 3244012 - 3244290 | 10316.5 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04489864_108165 | Not Available | + | 3244320 - 3245822 | 57032.9 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN04489864_108166 | Not Available | + | 3245823 - 3247517 | 63449.6 |
| protein of unknown function | SAMN04489864_108167 | Not Available | + | 3247495 - 3248289 | 29424.0 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN04489864_108168 | Not Available | + | 3248309 - 3249583 | 47977.0 |
| twin arginine-targeting protein translocase, tata/e family | SAMN04489864_108169 | Not Available | + | 3249679 - 3250086 | 15106.8 |
| sec-independent protein translocase protein tata | SAMN04489864_108170 | Not Available | + | 3250106 - 3250312 | 7240.05 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN04489864_108171 | Not Available | + | 3250343 - 3251767 | 51996.5 |
| membrane-bound lytic murein transglycosylase d | SAMN04489864_108172 | Not Available | + | 3251809 - 3253167 | 51100.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.