Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sporulation related domain-containing protein | SAMN04489864_108133 | Not Available | + | 3214718 - 3215158 | 17015.8 |
| amidohydrolase | SAMN04489864_108134 | Not Available | + | 3215206 - 3216387 | 43255.8 |
| hypothetical protein | SAMN04489864_108135 | Not Available | + | 3216387 - 3216527 | 5007.1 |
| hypothetical protein | SAMN04489864_108136 | Not Available | + | 3216536 - 3217483 | 37139.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN04489864_108137 | Not Available | + | 3217528 - 3219087 | 57505.0 |
| lysophospholipase l1 | SAMN04489864_108138 | Not Available | + | 3219095 - 3219775 | 25182.6 |
| dna primase | SAMN04489864_108139 | Not Available | + | 3219797 - 3221737 | 73421.8 |
| putative endonuclease | SAMN04489864_108140 | Not Available | + | 3221766 - 3222128 | 13909.5 |
| glutamine cyclotransferase | SAMN04489864_108141 | Not Available | + | 3222109 - 3223176 | 39934.1 |
| protein of unknown function | SAMN04489864_108142 | Not Available | - | 3223182 - 3223703 | 19093.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.