Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inorganic phosphate transporter, pit family | SAMN04489864_10893 | Not Available | - | 3171099 - 3172403 | 47209.4 |
| hypothetical protein | SAMN04489864_10894 | Not Available | - | 3172413 - 3173054 | 23951.8 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN04489864_10895 | Not Available | - | 3173137 - 3174159 | 39045.2 |
| probable dna metabolism protein | SAMN04489864_10896 | Not Available | - | 3174246 - 3175004 | 30291.4 |
| putative dna modification/repair radical sam protein | SAMN04489864_10897 | Not Available | - | 3175019 - 3176326 | 50181.2 |
| uncharacterized protein | SAMN04489864_10898 | Not Available | - | 3176349 - 3176996 | 24476.3 |
| helix-turn-helix domain-containing protein | SAMN04489864_10899 | Not Available | - | 3177050 - 3177295 | 9602.88 |
| putative n6-adenine-specific dna methylase | SAMN04489864_108100 | Not Available | - | 3177360 - 3178565 | 45315.5 |
| protein of unknown function | SAMN04489864_108101 | Not Available | + | 3178745 - 3179113 | 13593.9 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN04489864_108102 | Not Available | + | 3179294 - 3181096 | 67928.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.