Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crcb protein | SAMN04489864_10873 | Not Available | - | 3151556 - 3151930 | 13535.9 |
| hypothetical protein | SAMN04489864_10874 | Not Available | + | 3152040 - 3152336 | 11177.5 |
| iron complex outermembrane recepter protein | SAMN04489864_10875 | Not Available | + | 3152399 - 3154696 | 84209.0 |
| abc-2 type transport system atp-binding protein | SAMN04489864_10876 | Not Available | + | 3154952 - 3155779 | 30686.5 |
| hypothetical protein | SAMN04489864_10877 | Not Available | + | 3155793 - 3156605 | 31034.3 |
| regulatory protein, gntr family | SAMN04489864_10878 | Not Available | + | 3156624 - 3156998 | 14715.6 |
| hypothetical protein | SAMN04489864_10879 | Not Available | + | 3156946 - 3157875 | 33739.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04489864_10880 | Not Available | + | 3158032 - 3159021 | 37149.1 |
| predicted dehydrogenase | SAMN04489864_10881 | Not Available | - | 3159035 - 3160048 | 38011.4 |
| hypothetical protein | SAMN04489864_10882 | Not Available | + | 3160115 - 3160459 | 13172.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.