Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_10853 | Not Available | + | 3128726 - 3128911 | 6592.37 |
| poly-gamma-glutamate biosynthesis protein capa/ywtb (capsule formation), metallophosphatase superfamily | SAMN04489864_10854 | Not Available | - | 3128923 - 3130023 | 39882.0 |
| lipoprotein spr | SAMN04489864_10855 | Not Available | - | 3130097 - 3130648 | 20692.6 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN04489864_10856 | Not Available | + | 3131078 - 3132073 | 37115.4 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN04489864_10857 | Not Available | + | 3132132 - 3133742 | 56269.5 |
| uncharacterized protein | SAMN04489864_10858 | Not Available | + | 3133783 - 3134979 | 46426.8 |
| histidyl-trna synthetase | SAMN04489864_10859 | Not Available | + | 3135066 - 3136445 | 51131.8 |
| ketosteroid isomerase-related protein | SAMN04489864_10860 | Not Available | - | 3136446 - 3136916 | 17981.4 |
| response regulator receiver domain-containing protein | SAMN04489864_10861 | Not Available | - | 3136937 - 3137329 | 14678.9 |
| osmotically inducible protein osmc | SAMN04489864_10862 | Not Available | + | 3137463 - 3137882 | 14929.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.