Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04489864_10843 | Not Available | - | 3116578 - 3117144 | 22769.6 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04489864_10844 | Not Available | - | 3117128 - 3117658 | 20170.3 |
| conserved hypothetical protein | SAMN04489864_10845 | Not Available | + | 3117766 - 3118218 | 16928.0 |
| cyanophycin synthetase | SAMN04489864_10846 | Not Available | - | 3118315 - 3120945 | 96922.6 |
| cyanophycinase | SAMN04489864_10847 | Not Available | + | 3121171 - 3122046 | 31354.8 |
| l-asparaginase | SAMN04489864_10848 | Not Available | + | 3122058 - 3122900 | 29751.1 |
| hypothetical protein | SAMN04489864_10849 | Not Available | + | 3122944 - 3123633 | 25426.5 |
| signal transduction histidine kinase | SAMN04489864_10850 | Not Available | + | 3123657 - 3125600 | 73126.0 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04489864_10851 | Not Available | + | 3125610 - 3126245 | 24150.4 |
| c-terminal processing peptidase-1. serine peptidase. merops family s41a | SAMN04489864_10852 | Not Available | + | 3126401 - 3128629 | 82210.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.