Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN04489864_10823 | Not Available | + | 3096202 - 3096735 | 20673.7 |
| acyl carrier protein | SAMN04489864_10824 | Not Available | + | 3096738 - 3096971 | 8937.64 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04489864_10825 | Not Available | + | 3096975 - 3097982 | 36856.1 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04489864_10826 | Not Available | + | 3098049 - 3099152 | 40777.0 |
| protein of unknown function | SAMN04489864_10827 | Not Available | + | 3099142 - 3100380 | 48058.4 |
| alpha-1,3-rhamnosyltransferase | SAMN04489864_10828 | Not Available | + | 3100383 - 3101255 | 33622.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04489864_10829 | Not Available | + | 3101275 - 3102381 | 42458.8 |
| atp-binding cassette, subfamily b, msba | SAMN04489864_10830 | Not Available | - | 3102388 - 3104217 | 67661.6 |
| lao/ao transport system kinase | SAMN04489864_10831 | Not Available | + | 3104362 - 3105252 | 32672.7 |
| ompa-ompf porin, oop family | SAMN04489864_10832 | Not Available | + | 3105822 - 3107162 | 47264.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.