Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen oxidase | SAMN04489864_107181 | Not Available | + | 3048185 - 3049078 | 34293.6 |
| 5'-nucleotidase, c-terminal domain | SAMN04489864_107182 | Not Available | + | 3049069 - 3049818 | 27734.6 |
| 5'-nucleotidase | SAMN04489864_107183 | Not Available | + | 3049796 - 3050746 | 34966.0 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04489864_107184 | Not Available | - | 3050743 - 3052005 | 46019.8 |
| predicted dehydrogenase | SAMN04489864_107185 | Not Available | + | 3052178 - 3053461 | 47872.4 |
| heat repeat | SAMN04489864_107186 | Not Available | + | 3053492 - 3056881 | 122932.0 |
| predicted dehydrogenase | SAMN04489864_107187 | Not Available | + | 3056926 - 3058362 | 53063.8 |
| predicted dehydrogenase | SAMN04489864_107188 | Not Available | + | 3058344 - 3059447 | 40891.8 |
| pp_02649 | SAMN04489864_107189 | Not Available | - | 3059448 - 3060539 | Not Available |
| transcriptional regulator, laci family | SAMN04489864_107190 | Not Available | - | 3060616 - 3061710 | 40383.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.