Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN04489864_107161 | Not Available | + | 3025988 - 3026848 | 32806.1 |
| acetoin utilization deacetylase acuc | SAMN04489864_107162 | Not Available | + | 3026873 - 3027775 | 33458.2 |
| trna pseudouridine65 synthase | SAMN04489864_107163 | Not Available | + | 3027801 - 3028484 | 26217.1 |
| hypothetical protein | SAMN04489864_107164 | Not Available | + | 3028510 - 3029256 | 27799.2 |
| dna polymerase-4 | SAMN04489864_107165 | Not Available | + | 3029368 - 3030468 | 41505.4 |
| cytochrome c peroxidase | SAMN04489864_107166 | Not Available | - | 3030501 - 3031640 | 43293.2 |
| hypothetical protein | SAMN04489864_107167 | Not Available | - | 3031644 - 3033200 | 58639.3 |
| protein of unknown function | SAMN04489864_107168 | Not Available | - | 3033242 - 3034561 | 48147.9 |
| tonb-dependent receptor plug domain | SAMN04489864_107169 | Not Available | - | 3034575 - 3037310 | 100649.0 |
| hypothetical protein | SAMN04489864_107170 | Not Available | + | 3037503 - 3037661 | 6268.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.