Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate:nucleotide phosphotransferase, ppk2 family | SAMN04489864_107151 | Not Available | + | 3016482 - 3017363 | 33918.3 |
| beta-lactamase enzyme family protein | SAMN04489864_107152 | Not Available | - | 3017368 - 3018567 | 46371.1 |
| hypothetical protein | SAMN04489864_107153 | Not Available | + | 3018752 - 3019333 | 21506.0 |
| nad-dependent deacetylase | SAMN04489864_107154 | Not Available | + | 3019400 - 3020092 | 25468.5 |
| mj0570-related uncharacterized domain-containing protein | SAMN04489864_107155 | Not Available | + | 3020085 - 3020780 | 26297.0 |
| hypothetical protein | SAMN04489864_107156 | Not Available | - | 3021013 - 3021261 | 9605.66 |
| peptidase s46 | SAMN04489864_107157 | Not Available | - | 3021289 - 3023460 | 81650.5 |
| gaf domain-containing protein | SAMN04489864_107158 | Not Available | + | 3023578 - 3024054 | 17155.6 |
| dna-3-methyladenine glycosylase | SAMN04489864_107159 | Not Available | + | 3024047 - 3024652 | 22057.7 |
| kynureninase | SAMN04489864_107160 | Not Available | + | 3024705 - 3025991 | 48570.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.