Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter | SAMN04489864_107111 | Not Available | + | 2970042 - 2971415 | 51453.4 |
| dna polymerase (family 10) | SAMN04489864_107112 | Not Available | + | 2971442 - 2973130 | 63264.0 |
| protein of unknown function | SAMN04489864_107113 | Not Available | + | 2973143 - 2973745 | 23197.6 |
| adp-heptose:lps heptosyltransferase | SAMN04489864_107114 | Not Available | + | 2973769 - 2974800 | 38901.8 |
| phosphohistidine phosphatase | SAMN04489864_107115 | Not Available | + | 2974793 - 2975287 | 18434.2 |
| amp nucleosidase | SAMN04489864_107116 | Not Available | - | 2975290 - 2976153 | 31741.6 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN04489864_107117 | Not Available | - | 2976238 - 2977476 | 46163.9 |
| atp-dependent clp protease, protease subunit | SAMN04489864_107118 | Not Available | - | 2977483 - 2978169 | 25464.7 |
| trigger factor | SAMN04489864_107119 | Not Available | - | 2978463 - 2979809 | 51108.8 |
| Trna-leu | Not Available | Not Available | + | 2979878 - 2979962 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.