Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_101250 | Not Available | + | 267215 - 269035 | 68230.1 |
| hypothetical protein | SAMN04489864_101251 | Not Available | + | 269104 - 270897 | 68283.6 |
| dipeptidyl-peptidase-4 | SAMN04489864_101252 | Not Available | - | 270917 - 273037 | 80381.8 |
| branched-chain amino acid aminotransferase | SAMN04489864_101253 | Not Available | - | 273117 - 274181 | 39036.5 |
| tryptophan 2,3-dioxygenase apoenzyme | SAMN04489864_101254 | Not Available | - | 274271 - 275224 | 37376.8 |
| d-3-phosphoglycerate dehydrogenase | SAMN04489864_101255 | Not Available | - | 275403 - 276701 | 49117.2 |
| nucleoside-diphosphate-sugar epimerase | SAMN04489864_101256 | Not Available | - | 276698 - 277666 | 35215.4 |
| arginase family enzyme | SAMN04489864_101257 | Not Available | + | 277707 - 278915 | 46103.4 |
| peroxiredoxin | SAMN04489864_101258 | Not Available | + | 278986 - 280143 | 41895.4 |
| phosphoribosylamine--glycine ligase | SAMN04489864_101259 | Not Available | - | 280218 - 281489 | 45221.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.