Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/carnithine racemase | SAMN04489864_101229 | Not Available | - | 245858 - 246622 | 28159.2 |
| tonb-dependent receptor plug domain | SAMN04489864_101230 | Not Available | - | 246629 - 249031 | 88872.1 |
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | SAMN04489864_101231 | Not Available | - | 249059 - 251740 | 98821.2 |
| dctp deaminase | SAMN04489864_101232 | Not Available | - | 251811 - 252347 | 20005.1 |
| 4'-phosphopantetheinyl transferase superfamily protein | SAMN04489864_101233 | Not Available | + | 252415 - 253056 | 24361.4 |
| lipoyl(octanoyl) transferase | SAMN04489864_101234 | Not Available | + | 253074 - 253769 | 26301.4 |
| hypothetical protein | SAMN04489864_101235 | Not Available | + | 253894 - 254361 | 16807.7 |
| protein of unknown function | SAMN04489864_101236 | Not Available | + | 254371 - 254682 | 11718.9 |
| lysophospholipase l1 | SAMN04489864_101237 | Not Available | + | 254679 - 255299 | 22586.0 |
| l-serine dehydratase | SAMN04489864_101238 | Not Available | - | 255285 - 256712 | 51014.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.