Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uracil phosphoribosyltransferase | SAMN04489864_101219 | Not Available | - | 230779 - 231423 | 23479.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN04489864_101220 | Not Available | - | 231457 - 233868 | 89547.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN04489864_101221 | Not Available | - | 233891 - 236380 | 92426.8 |
| thioredoxin | SAMN04489864_101222 | Not Available | + | 236484 - 237086 | 22807.7 |
| atp-dependent clp protease adaptor protein clps | SAMN04489864_101223 | Not Available | - | 237100 - 237381 | 10890.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04489864_101224 | Not Available | + | 237441 - 238487 | 38333.8 |
| smr domain-containing protein | SAMN04489864_101225 | Not Available | + | 238503 - 239453 | 35865.2 |
| hypothetical protein | SAMN04489864_101226 | Not Available | - | 239454 - 242165 | 102265.0 |
| mg2 domain-containing protein | SAMN04489864_101227 | Not Available | - | 242171 - 244972 | 105277.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04489864_101228 | Not Available | - | 244969 - 245838 | 30822.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.