Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN04489864_101209 | Not Available | + | 221719 - 222468 | 28749.9 |
| rhomboid protease glup | SAMN04489864_101210 | Not Available | + | 222472 - 223974 | 57486.7 |
| alpha-l-fucosidase | SAMN04489864_101211 | Not Available | - | 223971 - 225422 | 54264.4 |
| glycosyl transferase family 2 | SAMN04489864_101212 | Not Available | - | 225451 - 226368 | 35491.7 |
| methyltransferase domain-containing protein | SAMN04489864_101213 | Not Available | - | 226396 - 227157 | 29273.4 |
| hypothetical protein | SAMN04489864_101214 | Not Available | - | 227165 - 227812 | 24388.1 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04489864_101215 | Not Available | - | 227809 - 229128 | 48720.6 |
| hypothetical protein | SAMN04489864_101216 | Not Available | - | 229132 - 229524 | 13523.2 |
| dinb superfamily protein | SAMN04489864_101217 | Not Available | - | 229558 - 230082 | 19763.4 |
| putative hydrolase of the had superfamily | SAMN04489864_101218 | Not Available | - | 230093 - 230782 | 26424.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.