Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione synthase/rimk-type ligase, atp-grasp superfamily | SAMN04489864_101199 | Not Available | - | 209338 - 210360 | 38406.9 |
| esterase/lipase superfamily enzyme | SAMN04489864_101200 | Not Available | - | 210394 - 211200 | 31025.8 |
| enterochelin esterase | SAMN04489864_101201 | Not Available | + | 211266 - 212084 | 31494.7 |
| voltage-gated potassium channel | SAMN04489864_101202 | Not Available | + | 212115 - 212897 | 29512.0 |
| gtp-binding protein | SAMN04489864_101203 | Not Available | + | 213022 - 214830 | 67373.7 |
| thioredoxin-like | SAMN04489864_101204 | Not Available | + | 215196 - 215786 | 21930.8 |
| protease i | SAMN04489864_101205 | Not Available | - | 215795 - 216355 | 20441.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04489864_101206 | Not Available | - | 216439 - 217188 | 28776.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04489864_101207 | Not Available | - | 217190 - 218461 | 47787.7 |
| n-terminal domain of tricorn protease-containing protein | SAMN04489864_101208 | Not Available | + | 218514 - 221687 | 120224.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.