Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated lipoprotein gldj | SAMN04489864_101189 | Not Available | - | 200356 - 201933 | 58334.2 |
| hypothetical protein | SAMN04489864_101190 | Not Available | + | 202198 - 203379 | 42978.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN04489864_101191 | Not Available | + | 203376 - 203852 | 17430.3 |
| hypothetical protein | SAMN04489864_101192 | Not Available | - | 203853 - 204722 | 32087.5 |
| polyisoprenoid-binding protein ycei | SAMN04489864_101193 | Not Available | - | 204722 - 205252 | 19135.3 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04489864_101194 | Not Available | - | 205382 - 205972 | 22698.7 |
| hypothetical protein | SAMN04489864_101195 | Not Available | - | 205972 - 206139 | 5982.41 |
| hypothetical protein | SAMN04489864_101196 | Not Available | - | 206156 - 207343 | 45481.6 |
| gmp synthase-glutamine amidotransferase | SAMN04489864_101197 | Not Available | - | 207391 - 208206 | 30871.0 |
| carboxylate-amine ligase | SAMN04489864_101198 | Not Available | - | 208210 - 209313 | 42242.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.