Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type lipoprotein export system, atpase component | SAMN04489864_104110 | Not Available | + | 1850528 - 1851211 | 25533.9 |
| putative abc transport system permease protein | SAMN04489864_104111 | Not Available | + | 1851259 - 1853679 | 90588.8 |
| putative abc transport system permease protein | SAMN04489864_104112 | Not Available | + | 1853755 - 1856151 | 89141.9 |
| arylsulfatase a | SAMN04489864_104113 | Not Available | + | 1856315 - 1857820 | 55239.3 |
| arylsulfatase a | SAMN04489864_104114 | Not Available | + | 1857824 - 1859863 | 75772.8 |
| predicted rna-binding protein, contains pua-like domain | SAMN04489864_104115 | Not Available | + | 1859914 - 1860318 | 15430.4 |
| hypothetical protein | SAMN04489864_104116 | Not Available | + | 1860357 - 1860842 | 17408.2 |
| nhap-type na+/h+ or k+/h+ antiporter | SAMN04489864_104117 | Not Available | - | 1860835 - 1862019 | 44230.5 |
| acyl-coa hydrolase | SAMN04489864_104118 | Not Available | - | 1862032 - 1862511 | 17808.4 |
| alpha-amylase | SAMN04489864_104119 | Not Available | + | 1862624 - 1864096 | 56362.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.