Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04489864_10450 | Not Available | + | 1760582 - 1762171 | 59455.3 |
| n-acetylneuraminate lyase | SAMN04489864_10451 | Not Available | + | 1762276 - 1763199 | 33879.9 |
| hypothetical protein | SAMN04489864_10452 | Not Available | + | 1763236 - 1764414 | 42557.4 |
| sugar phosphate permease | SAMN04489864_10453 | Not Available | + | 1764411 - 1765658 | 45591.7 |
| sialidase-1 | SAMN04489864_10454 | Not Available | + | 1765671 - 1767212 | 56733.9 |
| sialate o-acetylesterase | SAMN04489864_10455 | Not Available | + | 1767217 - 1769289 | 78079.8 |
| n-acylglucosamine 2-epimerase | SAMN04489864_10456 | Not Available | + | 1769296 - 1770477 | 45936.4 |
| n-acetyl-beta-hexosaminidase | SAMN04489864_10457 | Not Available | + | 1770490 - 1773183 | 101642.0 |
| hexosaminidase | SAMN04489864_10458 | Not Available | + | 1773206 - 1775239 | 76433.3 |
| cubico group peptidase, beta-lactamase class c family | SAMN04489864_10459 | Not Available | + | 1775241 - 1777010 | 65902.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.