Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helicase | SAMN04489864_10440 | Not Available | - | 1745438 - 1747528 | 77882.0 |
| uncharacterized conserved protein yece, duf72 family | SAMN04489864_10441 | Not Available | + | 1747663 - 1748424 | 29920.6 |
| pas domain s-box-containing protein | SAMN04489864_10442 | Not Available | - | 1748430 - 1749887 | 55621.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04489864_10443 | Not Available | - | 1749896 - 1750690 | 29480.8 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN04489864_10444 | Not Available | + | 1750796 - 1751914 | 41739.9 |
| predicted dehydrogenase | SAMN04489864_10445 | Not Available | + | 1751956 - 1753263 | 48729.0 |
| arylsulfatase | SAMN04489864_10446 | Not Available | + | 1753251 - 1754714 | 53799.6 |
| arylsulfatase a | SAMN04489864_10447 | Not Available | + | 1754735 - 1756264 | 58699.9 |
| dna-binding transcriptional regulator, fadr family | SAMN04489864_10448 | Not Available | - | 1756277 - 1756981 | 26736.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_10449 | Not Available | + | 1757158 - 1760571 | 124680.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.