Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fasciclin domain-containing protein | SAMN04489864_10430 | Not Available | + | 1730068 - 1730655 | 22009.1 |
| protein of unknown function | SAMN04489864_10431 | Not Available | + | 1730667 - 1731698 | 39113.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_10432 | Not Available | + | 1731721 - 1734900 | 116922.0 |
| starch-binding associating with outer membrane | SAMN04489864_10433 | Not Available | + | 1734912 - 1736408 | 56496.8 |
| fasciclin domain-containing protein | SAMN04489864_10434 | Not Available | + | 1736413 - 1737195 | 29169.1 |
| protein of unknown function | SAMN04489864_10435 | Not Available | + | 1737247 - 1738848 | 57012.6 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN04489864_10436 | Not Available | + | 1738861 - 1740624 | 63418.0 |
| f5/8 type c domain-containing protein | SAMN04489864_10437 | Not Available | + | 1740644 - 1742581 | 71345.4 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN04489864_10438 | Not Available | + | 1742587 - 1744242 | 60015.6 |
| hypothetical protein | SAMN04489864_10439 | Not Available | - | 1744462 - 1745100 | 23380.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.