Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_10420 | Not Available | + | 1711947 - 1713611 | 62009.1 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN04489864_10421 | Not Available | + | 1713769 - 1714617 | 29585.6 |
| dna-binding transcriptional regulator of sugar metabolism, deor/glpr family | SAMN04489864_10422 | Not Available | - | 1714625 - 1715371 | 27482.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_10423 | Not Available | + | 1715604 - 1719008 | 125155.0 |
| starch-binding associating with outer membrane | SAMN04489864_10424 | Not Available | + | 1719027 - 1720835 | 67774.1 |
| protein of unknown function | SAMN04489864_10425 | Not Available | + | 1720871 - 1722298 | 50625.9 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN04489864_10426 | Not Available | + | 1722304 - 1723749 | 53844.0 |
| purple acid phosphatase, n-terminal domain | SAMN04489864_10427 | Not Available | + | 1723941 - 1725149 | 45292.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_10428 | Not Available | + | 1725387 - 1728371 | 112493.0 |
| starch-binding associating with outer membrane | SAMN04489864_10429 | Not Available | + | 1728404 - 1729948 | 57977.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.