Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_10410 | Not Available | - | 1694093 - 1694308 | 7473.04 |
| uncharacterized membrane protein | SAMN04489864_10411 | Not Available | - | 1694365 - 1694763 | 14779.4 |
| two component regulator propeller | SAMN04489864_10412 | Not Available | + | 1694823 - 1699019 | 159146.0 |
| right handed beta helix region | SAMN04489864_10413 | Not Available | - | 1699028 - 1700509 | 54396.5 |
| beta-galactosidase | SAMN04489864_10414 | Not Available | - | 1700519 - 1703194 | 100317.0 |
| hypothetical protein | SAMN04489864_10415 | Not Available | - | 1703206 - 1704657 | 55361.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_10416 | Not Available | + | 1705001 - 1707985 | 110372.0 |
| starch-binding associating with outer membrane | SAMN04489864_10417 | Not Available | + | 1707996 - 1709558 | 58394.0 |
| right handed beta helix region | SAMN04489864_10418 | Not Available | + | 1709607 - 1711391 | 63676.6 |
| hypothetical protein | SAMN04489864_10419 | Not Available | + | 1711391 - 1711966 | 22485.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.