Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase-1 | SAMN04489864_103446 | Not Available | - | 1675684 - 1677033 | 48419.7 |
| acyl carrier protein | SAMN04489864_103447 | Not Available | - | 1677033 - 1677293 | 9761.62 |
| hypothetical protein | SAMN04489864_103448 | Not Available | - | 1677304 - 1677849 | 20424.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04489864_103449 | Not Available | - | 1677853 - 1678575 | 26067.7 |
| hypothetical protein | SAMN04489864_103450 | Not Available | + | 1678715 - 1679422 | 26422.9 |
| ssu ribosomal protein s10p | SAMN04489864_103451 | Not Available | - | 1679474 - 1679779 | 11418.2 |
| elongation factor g | SAMN04489864_103452 | Not Available | - | 1679841 - 1681955 | 77865.0 |
| small subunit ribosomal protein s7 | SAMN04489864_103453 | Not Available | - | 1681975 - 1682442 | 17491.4 |
| ssu ribosomal protein s12p | SAMN04489864_103454 | Not Available | - | 1682459 - 1682872 | 15037.5 |
| transposase | SAMN04489864_103455 | Not Available | + | 1683853 - 1684218 | 13923.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.