Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s19 | SAMN04489864_103436 | Not Available | - | 1669509 - 1669775 | 9989.11 |
| lsu ribosomal protein l2p | SAMN04489864_103437 | Not Available | - | 1669775 - 1670599 | 29768.0 |
| large subunit ribosomal protein l23 | SAMN04489864_103438 | Not Available | - | 1670619 - 1670909 | 10685.1 |
| lsu ribosomal protein l4p | SAMN04489864_103439 | Not Available | - | 1670911 - 1671540 | 22916.6 |
| large subunit ribosomal protein l3 | SAMN04489864_103440 | Not Available | - | 1671545 - 1672162 | 21835.2 |
| uncharacterized membrane protein | SAMN04489864_103441 | Not Available | - | 1672474 - 1672869 | 14543.3 |
| hypothetical protein | SAMN04489864_103442 | Not Available | - | 1672866 - 1673702 | 28870.6 |
| hypothetical protein | SAMN04489864_103443 | Not Available | - | 1673807 - 1674520 | 28186.4 |
| holo-[acyl-carrier protein] synthase | SAMN04489864_103444 | Not Available | - | 1674477 - 1674878 | 15061.3 |
| enoyl-[acyl-carrier-protein] reductase | SAMN04489864_103445 | Not Available | - | 1674871 - 1675680 | 29130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.