Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s8 | SAMN04489864_103426 | Not Available | - | 1665187 - 1665585 | 14577.0 |
| small subunit ribosomal protein s14 | SAMN04489864_103427 | Not Available | - | 1665739 - 1666008 | 10092.4 |
| large subunit ribosomal protein l5 | SAMN04489864_103428 | Not Available | - | 1666008 - 1666574 | 21246.1 |
| large subunit ribosomal protein l24 | SAMN04489864_103429 | Not Available | - | 1666574 - 1666912 | 12010.9 |
| lsu ribosomal protein l14p | SAMN04489864_103430 | Not Available | - | 1666914 - 1667282 | 13363.4 |
| small subunit ribosomal protein s17 | SAMN04489864_103431 | Not Available | - | 1667284 - 1667538 | 9780.14 |
| large subunit ribosomal protein l29 | SAMN04489864_103432 | Not Available | - | 1667552 - 1667761 | 7750.51 |
| large subunit ribosomal protein l16 | SAMN04489864_103433 | Not Available | - | 1667834 - 1668256 | 15928.9 |
| ssu ribosomal protein s3p | SAMN04489864_103434 | Not Available | - | 1668291 - 1669133 | 30314.6 |
| large subunit ribosomal protein l22 | SAMN04489864_103435 | Not Available | - | 1669139 - 1669501 | 13665.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.