Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s13p | SAMN04489864_103416 | Not Available | - | 1659955 - 1660332 | 14190.3 |
| lsu ribosomal protein l36p | SAMN04489864_103417 | Not Available | - | 1660405 - 1660521 | 4548.8 |
| translation initiation factor if-1 | SAMN04489864_103418 | Not Available | - | 1660530 - 1660748 | 8308.24 |
| methionyl aminopeptidase | SAMN04489864_103419 | Not Available | - | 1660820 - 1661605 | 28546.6 |
| protein translocase subunit secy/sec61 alpha | SAMN04489864_103420 | Not Available | - | 1661646 - 1662983 | 48367.8 |
| lsu ribosomal protein l15p | SAMN04489864_103421 | Not Available | - | 1662987 - 1663433 | 15603.0 |
| large subunit ribosomal protein l30 | SAMN04489864_103422 | Not Available | - | 1663531 - 1663710 | 6590.37 |
| ssu ribosomal protein s5p | SAMN04489864_103423 | Not Available | - | 1663715 - 1664233 | 18056.1 |
| large subunit ribosomal protein l18 | SAMN04489864_103424 | Not Available | - | 1664252 - 1664605 | 12658.3 |
| large subunit ribosomal protein l6 | SAMN04489864_103425 | Not Available | - | 1664611 - 1665168 | 20256.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.